BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036C04SP1|AL430195
(949 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1745 1712 0.0
>3x_Contig1745
Length = 19830
Score = 1712 bits (861), Expect = 0.0
Identities = 892/903 (98%), Gaps = 1/903 (0%)
Strand = Plus / Minus
Query: 48 gtaatccaagctaacacctctgcatggcagaaccaatcttttacaaaaaggtaacagtca 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19830 gtaatccaagctaacacctctgcatggcagaaccaatcttttacaaaaaggtaacagtca 19771
Query: 108 tgggcaagttcttcgatattatcttggttgatctccgcag-cttcaatttttctactctc 166
|||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||||
Sbjct: 19770 tgggcaagttattcgatattattttggttgatctccgcaggcttcaatttttttactctc 19711
Query: 167 ataaacaaatcatgcacacctctaagatgtgttctccagtcagaactttttattgaacta 226
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 19710 ataaacaaatcatgcacacctctaagatgtgttctccagtcagaacttttttttgaacta 19651
Query: 227 tttgcagcaaaaagcacagttaccgtgaaggtaagcgatatattaccgcaataatcattc 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19650 tttgcagcaaaaagcacagttaccgtgaaggtaagcgatatattaccgcaataatcattc 19591
Query: 287 gacttccttattagagatgtcaactgatccaaacatcttttcaatgttggcattcgtaca 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19590 gacttccttattagagatgtcaactgatccaaacatcttttcaatgttggcattcgtaca 19531
Query: 347 tacctatcccatatatgggagargtattttaaattggagttataataggcgtctttcatg 406
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 19530 tacctatcccatatatgggagaagtattttaaattggagttataataggcgtctttcatg 19471
Query: 407 aataatgcggtgacataaatgagaacatccttcattaccgggtccttcctacccatagta 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19470 aataatgcggtgacataaatgagaacatccttcattaccgggtccttcctacccatagta 19411
Query: 467 atgaaatcattcaacaaaggatcgaratgattctcaaatggaaaaagaattaaattgcca 526
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 19410 atgaaatcattcaacaaaggatcgaaatgattctcaaatggaaaaagaattaaattgcca 19351
Query: 527 ccaagtagcgttactcgtgagactgtccaaatgaagtttaataattttggatcatctaaa 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19350 ccaagtagcgttactcgtgagactgtccaaatgaagtttaataattttggatcatctaaa 19291
Query: 587 ggaatggttgtcgcggctgagggattctcggtcgcatacagcaattgaataggatcataa 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19290 ggaatggttgtcgcggctgagggattctcggtcgcatacagcaattgaataggatcataa 19231
Query: 647 gtgctgaagacagaaaaaatctctgagtttgaggcacccctccagcataacttaaataga 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19230 gtgctgaagacagaaaaaatctctgagtttgaggcacccctccagcataacttaaataga 19171
Query: 707 tttgtctgagaactttgtgctaattctggtgttgtattgcgagtctgattttgatcaaat 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19170 tttgtctgagaactttgtgctaattctggtgttgtattgcgagtctgattttgatcaaat 19111
Query: 767 ctgagtagattcaaaaagttccaatccgtagtgmatatgtatatgtratccctgatgtta 826
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 19110 ctgagtagattcaaaaagttccaatccgtaggtgatatgtatatgtaatccctgatgtta 19051
Query: 827 accagatcagcatcaaaatttgtgtcatctgtgtcaggtaccatttcggtttgttctcct 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19050 accagatcagcatcaaaatttgtgtcatctgtgtcaggtaccatttcggtttgttctcct 18991
Query: 887 cctgctaatgttccagagccggtctgtgtatggccagagttgaattgtgtatatgcatca 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18990 cctgctaatgttccagagccggtctgtgtatggccagagttgaattgtgtatatgcatca 18931
Query: 947 ttg 949
|||
Sbjct: 18930 ttg 18928
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6898
Number of Sequences: 1807
Number of extensions: 6898
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 949
length of database: 10,358,551
effective HSP length: 16
effective length of query: 933
effective length of database: 10,329,639
effective search space: 9637553187
effective search space used: 9637553187
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)